Publications

Published research from our lab and affiliated members

2024

  1. Filamentous fungal pellets as versatile platforms for cell immobilization: developments to date and future perspectives.
    Ogawa, M., Moreno-Garcia, J., Barzee, T. J.
    Microbial Cell Factories. https://doi.org/10.1186/s12934-024-02554-3

  2. Impacts of material characteristics on the anaerobic digestion kinetics and biomethane potential of American bourbon and whiskey stillage.
    Hockensmith, D., Crofcheck, C., Barzee, T. J.
    Journal of Environmental Management. https://doi.org/10.1016/j.jenvman.2024.121975

  3. Potential of utilizing almond hull extract for filamentous fungi production by submerged cultivation.
    Cao, L., Barzee, T. J., El Mashad, H. M., Pan, Z., Zhang, R.
    Food Bioengineering. https://doi.org/10.1002/fbe2.12079

2023

  1. Fungal-Assisted Immobilization of Microalgae for Simultaneous Harvesting and Product Customization: Effects of Geometry, Loading, and Microalgae Concentration.
    Talukdar, S., Barzee, T. J.
    Algal Research. https://doi.org/10.1016/j.algal.2023.103242

  2. Immobilization of Diatom Phaeodactylum tricornutum with Filamentous Fungi and its Kinetics.
    Barzee, T. J., El-Mashad, H., Burch, A. R., Franz, A. K., Zhang, R.
    Journal of Microbiology and Biotechnology. https://doi.org/10.4014/jmb.2209.09042

  3. Anaerobic Digestion and Alternative Manure Management Technologies for Methane Emissions Mitigation on California Dairies.
    El Mashad, H., Barzee, T. J., Franco, R. B., Zhang, R., Kaffka, S., Mitloehner, F.
    Atmosphere. https://doi.org/10.3390/atmos14010120

  4. Effect of Mechanical Solids Separators on the Mitigation of Methane Emissions from Dairy Manure Lagoons.
    Edalati, A., Chen, Y., Barzee, T. J., El-Mashad, H. M., Zhang, R.
    Journal of the ASABE. https://doi.org/10.13031/ja.15371

2022

  1. Pilot Microalgae Cultivation Using Food Waste Digestate with Minimal Resource Inputs.
    Barzee, T. J., Yothers, C., Edalati, A., Rude, K., Chio, A., El-Mashad, H., Franz, A. K., Zhang, R.
    Bioresource Technology Reports. https://doi.org/10.1016/j.biteb.2022.101200

  2. Cell-Cultivated Food Production and Processing: A Review.
    Barzee, T. J., El-Mashad, H., Cao, L., Chio, A., Pan, Z., Zhang, R.
    Food Bioengineering. https://doi.org/10.1002/fbe2.12009.

  3. Growth Potential of Microalgae on Ammonia-Rich Digester Effluent for Wastewater Remediation.
    Rude, K., Kutney, S., Yothers, C., Barzee, T., Zhang, R., Franz, A.
    Algal Research. https://doi.org/10.1016/j.algal.2021.102613.

2021

  1. Fungi for Future Foods
    Barzee, T. J., Cao, L., Pan, Z., & Zhang, R.
    Journal of Future Foods, 1(1), 25–37. https://doi.org/10.1016/J.JFUTFO.2021.09.002.

  2. Characterization of Nutrients and Biofertilizer Production from Food Waste and Dairy Manure Digestates
    Barzee, T. J., Edalati, A., Rapport, J. El-Mashad, H., Zhang, R.
    Transactions of the ASABE 64(4), 1153-1164. https://doi.org/doi: 10.13031/trans.13767

  3. Recycling Nut and Other Organic Waste on Farms for Sustainable Nutrient Management and Nematode Control.
    Zhang, R., El-Mashad, H., Jenkins, B., Westphal, A., Barzee, T., Edalati, A., Eberlein, C.
    Final Research Report to the California Department of Food and Agriculture

  4. California/Nevada Section Student Rally, The Second Annual… and First Virtual
    Barzee, T. J.
    Resource Magazine 28(4): 24-24. https://asabe.org/Portals/0/aPubs/Resource/PDF/Resource28-03MayJun2021.pdf.

2020

  1. The Potential of Constructed Wetland Plants for Bioethanol Production.
    Lin, Y., Zhao, Y., Ruan, X., Barzee, T. J., Zhang, Z., Kong, H., Zhang, X.
    BioEnergy Research 13, 43-49. https://doi.org/10.1007/s12155-019-10065-y

  2. Production of Antioxidants and Fungal Biomass as Poultry Feed from Almond Hulls.
    Zhang, R., El-Mashad, H., Barzee, T., Cao, L.
    Final Research Report to the Almond Board of California.

  3. Improving Microalgae Feedstock for Biofuel Production Using CO2 and Waste Nutrients from Anaerobic Digesters.
    Franz, A. K., Zhang, R., Yothers, C. W., Barzee, T. J., Kendall, A., Pan, Z., Rapport, J. L., Zhang, Y., Ro, J. W., El-Mashad, H., Rude, K., Liang, K. J., Chio, A., Chen, Y., Edalati, A.
    Final Research Report to the California Energy Commission.

2019

  1. Digestate Biofertilizers Support Similar or Higher Tomato Yields and Quality Than Mineral Fertilizer in a Subsurface Drip Fertigation System.
    Barzee, T. J., Edalati, A., El-Mashad, H., Wang, D., Scow, K., & Zhang, R.
    Frontiers in Sustainable Food Systems. https://doi.org/10.3389/fsufs.2019.00058

  2. Chapter 12: Carrot
    Barzee, T. J., El-Mashad, H. M., Zhang, R., Pan, Z. (Eds.) Pan, Z., Zhang, R., Zicari, S.
    Integrated Processing Technologies for Food and Agricultural By-Products https://doi.org/10.1016/B978-0-12-814138-0.00012-5

  3. Chapter 19: Producing oleaginous microorganisms using wastewater – methods and guidelines for lab and industrial scale production.
    Rude. K. M., Barzee, T. J., Franz, A. K. (Ed.) Balan, V.
    Microbial Lipid Production – Methods and protocol
    https://doi.org/10.1007/978-1-4939-9484-7_19

  4. Chapter 9: Citrus
    Chen, Y., Barzee, T. J., Zhang, R., Pan, Z. (Eds.) Pan, Z., Zhang, R., Zicari, S.
    Integrated Processing Technologies for Food and Agricultural By-Products
    https://doi.org/10.1016/B978-0-12-814138-0.00009-5

  5. Effect of Solid Separation on Mitigation of Methane Emission in Dairy Manure Lagoons
    Zhang, R., El-Mashad, H., Edalati, A., Chen, Y., Barzee, T., Lin, X.J., Kaffka, S., Campbell, M.
    Final Research Report to the California Department of Food and Agriculture.

2017

  1. Producing Valuable Co-Products and Improving Nutrient Management for Dairy Manure Digester Systems
    Zhang, R., Scow, K., El-Mashad, H., Edalati, A., Barzee, T., Wang, D., Rapport, J.
    Final Report to the California Department of Food and Agriculture.

2016

  1. Evaluation of Dairy Manure Management Practices for Greenhouse Gas Emissions Mitigation in California.
    Kaffka, S., Barzee, T., El-Mashad, H., Williams, R., Zicari, S., Zhang, R.
    Final Technical Report to the State of California Air Resources Board https://biomass.ucdavis.edu/wp-content/uploads/ARB-Report-Final-Draft-Transmittal-Feb-26-2016.pdf